Magis, Andrew T: search on Z-Library

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1

A Contemporary Prostate Cancer Grading System: A Validated Alternative to the Gleason Score

Epstein, Jonathan I., Zelefsky, Michael J., Sjoberg, Daniel D., Nelson, Joel B., Egevad, Lars, Magi-Galluzzi, Cristina, Vickers, Andrew J., Parwani, Anil V., Reuter, Victor E., Fine, Samson W., Eastha

Journal:

European Urology

Year:

2015

Language:

english

File:

PDF, 2.76 MB

english, 2015

2

Reply to "Precision medicine in the clouds"

Magis, Andrew T, Earls, John C, Glusman, Gustavo, Omenn, Gilbert S, Lovejoy, Jennifer C, Price, Nathan D, Hood, Leroy

Journal:

Nature Biotechnology

Year:

2018

Language:

english

File:

PDF, 142 KB

english, 2018

3

Blood metabolome predicts gut microbiome α-diversity in humans

Wilmanski, Tomasz, Rappaport, Noa, Earls, John C., Magis, Andrew T., Manor, Ohad, Lovejoy, Jennifer, Omenn, Gilbert S., Hood, Leroy, Gibbons, Sean M., Price, Nathan D.

Journal:

Nature Biotechnology

Year:

2019

Language:

english

File:

PDF, 2.40 MB

english, 2019

4

SNAPR: A Bioinformatics Pipeline for Efficient and Accurate RNA-Seq Alignment and Analysis

ANDREW T. MAGIS, CORY C. FUNK, NATHAN D. PRICE

Journal:

IEEE Transactions on Nuclear Science

Year:

2020

File:

PDF, 2.35 MB

2020

5

A wellness study of 108 individuals using personal, dense, dynamic data clouds

Price, Nathan D, Magis, Andrew T, Earls, John C, Glusman, Gustavo, Levy, Roie, Lausted, Christopher, McDonald, Daniel T, Kusebauch, Ulrike, Moss, Christopher L, Zhou, Yong, Qin, Shizhen, Moritz, Rober

Journal:

Nature Biotechnology

Year:

2017

Language:

english

File:

PDF, 5.00 MB

english, 2017

6

30. Structure-based Drug Design in the Search for New Treatment of Mitochondrial Diseases

Carolyn P. Ojano-Dirain, Andrew Magis, David A. Ostrov, Peter W. Stacpoole

Journal:

Year:

2009

Language:

english

File:

PDF, 55 KB

english, 2009

7

Low propagation loss silicon-on-sapphire waveguides for the mid-infrared

Li, Fangxin, Jackson, Stuart D., Grillet, Christian, Magi, Eric, Hudson, Darren, Madden, Steven J., Moghe, Yashodhan, O’Brien, Christopher, Read, Andrew, Duvall, Steven G.

Journal:

Year:

2011

Language:

english

File:

PDF, 1.07 MB

english, 2011

8

Multiomic blood correlates of genetic risk identify presymptomatic disease alterations

Wainberg, Michael, Magis, Andrew T., Earls, John C., Lovejoy, Jennifer C., Sinnott-Armstrong, Nasa, Omenn, Gilbert S., Hood, Leroy, Price, Nathan D.

Journal:

Proceedings of the National Academy of Sciences

Year:

2020

File:

PDF, 786 KB

2020

9

A Small Molecule Inhibitor, 1,2,4,5-Benzenetetraamine Tetrahydrochloride, Targeting the Y397 Site of Focal Adhesion Kinase Decreases Tumor Growth

Golubovskaya, Vita M., Nyberg, Carl, Zheng, Min, Kweh, Frederick, Magis, Andrew, Ostrov, David, Cance, William G.

Journal:

Journal of Medicinal Chemistry

Year:

2008

Language:

english

File:

PDF, 3.31 MB

english, 2008

10

Small-Molecule Bcl2 BH4 Antagonist for Lung Cancer Therapy

Han, Bingshe, Park, Dongkyoo, Li, Rui, Xie, Maohua, Owonikoko, Taofeek K., Zhang, Guojing, Sica, Gabriel L., Ding, Chunyong, Zhou, Jia, Magis, Andrew T., Chen, Zhuo G., Shin, Dong M., Ramalingam, Sure

Journal:

Year:

2015

Language:

english

File:

PDF, 3.43 MB

english, 2015

11

[IEEE 2006 IEEE/WIC/ACM International Conference on Web Intelligence and Intelligent Agent Technology Workshops - Hong Kong, China (2006.12.18-2006.12.22)] 2006 IEEE/WIC/ACM International Conference on Web Intelligence and Intelligent Agent Technology Workshops - On the Design of a Web-Based Decision Support System for Brain Tumour Diagnosis Using Distributed Agents

Arus, Carles, Celda, Bernardo, Dasmahaptra, Srinandan, Dupplaw, David, Gonzalez-Velez, Horacio, Huffel, Sabine, Lewis, Paul, I Ariet, Magi, Mier, Mariola, Peet, Andrew, Robles, Montserrat

Year:

2006

Language:

english

File:

PDF, 194 KB

english, 2006

12

Adult Cystic Nephroma and Mixed Epithelial and Stromal Tumor of the Kidney: Clinical, Radiographic, and Pathologic Characteristics

Brian R. Lane, Steven C. Campbell, Erick M. Remer, Amr F. Fergany, Stephen B. Williams, Andrew C. Novick, Christopher J. Weight, Cristina Magi-Galluzzi, Ming Zhou

Journal:

Year:

2008

Language:

english

File:

PDF, 1.79 MB

english, 2008

13

A Comparison of Cause-Specific Mortality among Patients with Low- or Intermediate-Risk Prostate Cancer

Jay P. Ciezki, Chandana A. Reddy, Clifford Robinson, Kenneth W. Angermeier, James Ulchaker, Nabil Chehade, Andrew Altman, Cristina Magi-Galluzzi, Eric A. Klein

Journal:

Year:

2010

Language:

english

File:

PDF, 108 KB

english, 2010

14

LAPAROSCOPIC PARTIAL NEPHRECTOMY FOR CYSTIC MASSES

SPALIVIERO, MASSIMILIANO, HERTS, BRIAN R., MAGI-GALLUZZI, CRISTINA, XU, MENG, DESAI, MIHIR M., KAOUK, JIHAD H., TUCKER, KAY, STEINBERG, ANDREW P., GILL, INDERBIR S.

Journal:

The Journal of Urology

Year:

2005

Language:

english

File:

PDF, 492 KB

english, 2005

15

A Genomic Classifier Improves Prediction of Metastatic Disease Within 5 Years After Surgery in Node-negative High-risk Prostate Cancer Patients Managed by Radical Prostatectomy Without Adjuvant Therapy

Klein, Eric A., Yousefi, Kasra, Haddad, Zaid, Choeurng, Voleak, Buerki, Christine, Stephenson, Andrew J., Li, Jianbo, Kattan, Michael W., Magi-Galluzzi, Cristina, Davicioni, Elai

Journal:

European Urology

Year:

2015

Language:

english

File:

PDF, 2.16 MB

english, 2015

16

Adhesion of Streptococcus equi to Air–Liquid Interface Ex Vivo Cultures of the Equine Guttural Pouch Mucosa Is Inhibited by Heparin

Magi, Gian Enrico, Arias, Maria Patricia, Vincenzetti, Silvia Vincenzetti, Attili, Anna Rita, Cuteri, Vincenzo, Preziuso, Silvia, Waller, Andrew Stephen, Rossi, Giacomo

Journal:

Journal of Equine Veterinary Science

Year:

2016

Language:

english

File:

PDF, 528 KB

english, 2016

17

Small Molecule KRAS Agonist for Mutant KRAS Cancer Therapy

Xu, Ke, Park, Dongkyoo, Magis, Andrew T., Zhang, Jun, Zhou, Wei, Sica, Gabriel L., Ramalingam, Suresh S., Curran, Walter J., Deng, Xingming

Journal:

Molecular Cancer

Year:

2019

File:

PDF, 7.12 MB

2019

18

Association of mTOR Pathway Markers and Clinical Outcomes in Patients with Intermediate/High-risk Prostate Cancer: Long-Term Analysis

Barata, Pedro C., Magi-Galluzzi, Cristina, Gupta, Ruby, Stephenson, Andrew J., Dreicer, Robert, Klein, Eric A., Garcia, Jorge A.

Journal:

Clinical Genitourinary Cancer

Year:

2019

Language:

english

File:

PDF, 1.93 MB

english, 2019

19

Multi-study Integration of Brain Cancer Transcriptomes Reveals Organ-Level Molecular Signatures

Sung, Jaeyun, Kim, Pan-Jun, Ma, Shuyi, Funk, Cory C., Magis, Andrew T., Wang, Yuliang, Hood, Leroy, Geman, Donald, Price, Nathan D., Rigoutsos, Isidore

Journal:

PLoS Computational Biology

Year:

2013

Language:

english

File:

PDF, 1.78 MB

english, 2013

20

Does cumulative prostate cancer length (CCL) in prostate biopsies improve prediction of clinically insignificant cancer at radical prostatectomy in patients eligible for active surveillance?

Chen, Derrick J., Falzarano, Sara M., McKenney, Jesse K., Przybycin, Chris G., Reynolds, Jordan P., Roma, Andres, Jones, J. Stephen, Stephenson, Andrew, Klein, Eric, Magi-Galluzzi, Cristina

Journal:

BJU International

Year:

2015

Language:

english

File:

PDF, 669 KB

english, 2015

21

A Multi-omic Association Study of Trimethylamine N-Oxide

Manor, Ohad, Zubair, Niha, Conomos, Matthew P., Xu, Xiaojing, Rohwer, Jesse E., Krafft, Cynthia E., Lovejoy, Jennifer C., Magis, Andrew T.

Journal:

Year:

2018

Language:

english

File:

PDF, 1.73 MB

english, 2018

22

Longitudinal analysis reveals transition barriers between dominant ecological states in the gut microbiome

Levy, Roie, Magis, Andrew T., Earls, John C., Manor, Ohad, Wilmanski, Tomasz, Lovejoy, Jennifer, Gibbons, Sean M., Omenn, Gilbert S., Hood, Leroy, Price, Nathan D.

Journal:

Proceedings of the National Academy of Sciences

Year:

2020

File:

PDF, 2.23 MB

2020

23

Plasma levels of soluble ACE2are associated with sex, Metabolic Syndrome, and its biomarkers in a large cohort, pointing to a possible mechanism for increased severity in COVID-19

Kornilov, Sergey A., Lucas, Isabelle, Jade, Kathleen, Dai, Chengzhen L., Lovejoy, Jennifer C., Magis, Andrew T.

Journal:

Year:

2020

File:

PDF, 1.81 MB

2020

24

A46, a benzothiophene-derived compound, suppresses Jak2-mediated pathologic cell growth

Anurima Majumder, Andrew T. Magis, Sung O. Park, Nicholas C. Figueroa, Rebekah Baskin, Annet Kirabo, Robert W. Allan, Zhizhuang Joe Zhao, Kirpal S. Bisht, György M. Keserű, Peter P. Sayeski

Journal:

Experimental Hematology

Year:

2012

Language:

english

File:

PDF, 1.34 MB

english, 2012

25

The top-scoring ‘N’ algorithm: a generalized relative expression classification method from small numbers of biomolecules

Andrew T Magis, Nathan D Price

Journal:

BMC Bioinformatics

Year:

2012

Language:

english

File:

PDF, 250 KB

english, 2012

26

Imprinted genes and imprinting control regions show predominant intermediate methylation in adult somatic tissues

Pervjakova, Natalia, Kasela, Silva, Morris, Andrew P, Kals, Mart, Metspalu, Andres, Lindgren, Cecilia M, Salumets, Andres, Mägi, Reedik

Journal:

Year:

2016

Language:

english

File:

PDF, 1.33 MB

english, 2016

27

A rare-variant test for high-dimensional data

Kaakinen, Marika, Mägi, Reedik, Fischer, Krista, Heikkinen, Jani, Järvelin, Marjo-Riitta, Morris, Andrew P, Prokopenko, Inga

Journal:

European Journal of Human Genetics

Year:

2017

Language:

english

File:

PDF, 1.91 MB

english, 2017

28

A PHENOME-WIDE ASSOCIATION STUDY (PHEWAS) OF BLOOD-BASED BIOLOGICAL MARKERS AND APOLIPOPROTEIN E GENOTYPE ACROSS THE ADULT LIFESPAN

Heath, Laura M., Earls, John C., Magis, Andrew T., Conomos, Matthew P., Rohwer, Jesse E., Hood, Lee, Lovejoy, Jennifer C., Price, Nathan D.

Journal:

Alzheimer's & Dementia

Year:

2018

Language:

english

File:

PDF, 98 KB

english, 2018

29

Assessing the impact of missing genotype data in rare variant association analysis

Reedik Mägi, Ashish Kumar, Andrew P Morris

Journal:

BMC Proceedings

Year:

2011

Language:

english

File:

PDF, 356 KB

english, 2011

30

Renal neuroendocrine tumours: a clinicopathological study

Brian R. Lane, Farah Chery, George Jour, Linda Sercia, Cristina Magi-Galluzzi, Andrew C. Novick, Ming Zhou

Journal:

BJU International

Year:

2007

Language:

english

File:

PDF, 389 KB

english, 2007

31

336 ALL HIGH-GRADE PROSTATE CANCERS CREATED EQUALLY? AN ANALYSIS OF CLINICAL FEATURES AND SURVIVAL AMONG PATIENTS WITH BIOPSY GLEASON SCORE 8, 9, AND 10 DISEASE

Lee, Byron, Garcia, Jorge, Dreicer, Robert, Tendulkar, Rahul, Stephans, Kevin, Magi-Galluzzi, Cristina, Klein, Eric, Oh, William, Stephenson, Andrew

Journal:

The Journal of Urology

Year:

2012

Language:

english

File:

PDF, 139 KB

english, 2012

32

An Expanded Genome-Wide Association Study of Type 2 Diabetes in Europeans

Scott, Robert A, Scott, Laura J, Mägi, Reedik, Marullo, Letizia, Gaulton, Kyle J, Kaakinen, Marika, Pervjakova, Natalia, Pers, Tune H, Johnson, Andrew D, Eicher, John D, Jackson, Anne U, Ferreira, Ter

Journal:

Year:

2017

Language:

english

File:

PDF, 6.65 MB

english, 2017

33

International Society of Urological Pathology (ISUP) Consensus Conference on Handling and Staging of Radical Prostatectomy Specimens. Working group 3: extraprostatic extension, lymphovascular invasion and locally advanced disease

Magi-Galluzzi, Cristina, Evans, Andrew J, Delahunt, Brett, Epstein, Jonathan I, Griffiths, David F, van der Kwast, Theo H, Montironi, Rodolfo, Wheeler, Thomas M, Srigley, John R, Egevad, Lars L, Humph

Journal:

Modern Pathology

Year:

2011

Language:

english

File:

PDF, 538 KB

english, 2011

34

Pathology Imagebase - A Reference Image Database for Standardization of Pathology

Egevad, Lars, Cheville, John, Evans, Andrew J, Hörnblad, Jonas, Kench, James G, Kristiansen, Glen, Leite, Katia R M, Magi-Galluzzi, Cristina, Pan, Chin-Chen, Samaratunga, Hemamali, Srigley, John R, Tr

Journal:

Year:

2017

Language:

english

File:

PDF, 762 KB

english, 2017

35

GWAMA: software for genome-wide association meta-analysis

Reedik Mägi, Andrew P Morris

Journal:

BMC Bioinformatics

Year:

2010

Language:

english

File:

PDF, 488 KB

english, 2010

36

Cultural Uses and Impacts of Fire: Past, Present, and Future: Analysis, Integration and Modeling of the Earth System (AIMES), Fourth Young Scholar's Network (YSN) Workshop; Boulder, Colorado, 14-18 July 2008

Magi, Brian, Coughlan, Michael, Edwards, Andrew, Hurteau, Matthew, Petty, Aaron, Seijo, Francisco, Wiedimyer, Christine

Journal:

Eos Transactions American Geophysical Union

Year:

2008

Language:

english

File:

PDF, 98 KB

english, 2008

37

P2-141: THE MANIFESTATION OF GENETIC RISK FOR ALZHEIMER'S DISEASE IN BLOOD ACROSS ADULTHOOD: A MULTI-OMIC PHENOME-WIDE ASSOCIATION STUDY (PHEWAS) APPROACH

Heath, Laura M., Earls, John C., Magis, Andrew T., Kornilov, Sergey A., Hood, Leroy, Lovejoy, Jennifer C., Price, Nathan D.

Journal:

Alzheimer's & Dementia

Year:

2019

Language:

english

File:

PDF, 85 KB

english, 2019

38

A shift in the salt bridge interaction of residues D620 and E621 mediates the constitutive activation of Jak2-H538Q/K539L

Gnanasambandan, Kavitha, Magis, Andrew T., Sayeski, Peter P.

Journal:

Molecular and Cellular Biochemistry

Year:

2012

Language:

english

File:

PDF, 1.60 MB

english, 2012

39

Trans-ethnic meta-regression of genome-wide association studies accounting for ancestry increases power for discovery and improves fine-mapping resolution

Mägi, Reedik, Horikoshi, Momoko, Sofer, Tamar, Mahajan, Anubha, Kitajima, Hidetoshi, Franceschini, Nora, McCarthy, Mark I., Morris, Andrew P.

Journal:

Human Molecular Genetics

Year:

2017

Language:

english

File:

PDF, 338 KB

english, 2017

40

Identification of Enoxacin as an Inhibitor of Osteoclast Formation and Bone Resorption by Structure-Based Virtual Screening

Ostrov, David A., Magis, Andrew T., Wronski, Thomas J., Chan, Edward K. L., Toro, Edgardo J., Donatelli, Richard E., Sajek, Kristen, Haroun, Ireni N., Nagib, Michael I., Piedrahita, Ana, Harris, Ashle

Journal:

Journal of Medicinal Chemistry

Year:

2009

Language:

english

File:

PDF, 2.43 MB

english, 2009

41

PSA Bounce and Biochemical Failure After Brachytherapy for Prostate Cancer: A Study of 820 Patients With a Minimum of 3 Years of Follow-Up

Murat Caloglu, Jay P. Ciezki, Chandana A. Reddy, Kenneth Angermeier, James Ulchaker, Nabil Chehade, Andrew Altman, Christina Magi-Galuzzi, Eric A. Klein

Journal:

International Journal of Radiation Oncology*Biology*Physics

Year:

2011

Language:

english

File:

PDF, 225 KB

english, 2011

42

Genome-Wide Association Analysis of Imputed Rare Variants: Application to Seven Common Complex Diseases

Reedik Mägi, Jennifer L. Asimit, Aaron G. Day-Williams, Eleftheria Zeggini, Andrew P. Morris

Journal:

Genetic Epidemiology

Year:

2012

Language:

english

File:

PDF, 936 KB

english, 2012

43

Small Molecule Chloropyramine Hydrochloride (C4) Targets the Binding Site of Focal Adhesion Kinase and Vascular Endothelial Growth Factor Receptor 3 and Suppresses Breast Cancer Growth in Vivo

Kurenova, Elena V., Hunt, Darell L., He, Dihua, Magis, Andrew T., Ostrov, David A., Cance, William G.

Journal:

Journal of Medicinal Chemistry

Year:

2009

Language:

english

File:

PDF, 2.65 MB

english, 2009

44

Noise Contributions in an Inducible Genetic Switch: A Whole-Cell Simulation Study

Roberts, Elijah, Magis, Andrew, Ortiz, Julio O., Baumeister, Wolfgang, Luthey-Schulten, Zaida, Csermely, Peter

Journal:

PLoS Computational Biology

Year:

2011

Language:

english

File:

PDF, 2.01 MB

english, 2011

45

A novel small molecule inhibitor of FAK decreases growth of human pancreatic cancer

Hochwald, Steven N., Nyberg, Carl, Zheng, Min, Zheng, Donghang, Wood, Cheng, Massoll, Nicole A., Magis, Andrew, Ostrov, David, Cance, William G., Golubovskaya, Vita M.

Journal:

Year:

2009

Language:

english

File:

PDF, 1.28 MB

english, 2009

46

Genome-wide association study of the modified Stumvoll Insulin Sensitivity Index identifies BCL2 and FAM19A2 as novel insulin sensitivity loci

Walford, Geoffrey A., Gustafsson, Stefan, Rybin, Denis, Stančáková, Alena, Chen, Han, Liu, Ching-Ti, Hong, Jaeyoung, Jensen, Richard A., Rice, Ken, Morris, Andrew P., Mägi, Reedik, Tönjes, Anke, Proko

Journal:

Year:

2016

Language:

english

File:

PDF, 2.53 MB

english, 2016

47

Custodial Relationships Of Grandparents Raising Grandchildren:Results of a home-based intervention study

Beatrice Yorker, Susan Kelley, Deborah Whitley, Andrew Lewis, Jennifer Magis, Amy Bergeron, Carol Napier

Journal:

Juvenile and Family Court Journal

Year:

1998

Language:

english

File:

PDF, 1.03 MB

english, 1998

48

Prostate Cancer Volume at Biopsy Predicts Clinically Significant Upgrading

Dong, Fei, Jones, J. Stephen, Stephenson, Andrew J., Magi-Galluzzi, Cristina, Reuther, Alwyn M., Klein, Eric A.

Journal:

The Journal of Urology

Year:

2008

Language:

english

File:

PDF, 106 KB

english, 2008

49

Sulfatide Preserves Insulin Crystals Not by Being Integrated in the Lattice but by Stabilizing Their Surface

Buschard, Karsten, Bracey, Austin W., McElroy, Daniel L., Magis, Andrew T., Osterbye, Thomas, Atkinson, Mark A., Bailey, Kate M., Posgai, Amanda L., Ostrov, David A.

Journal:

Journal of Diabetes Research

Year:

2016

Language:

english

File:

PDF, 1.70 MB

english, 2016

50

Mcl-1 interacts with Akt to promote lung cancer progression

Chen, Guo, Park, Dongkyoo, Magis, Andrew T, Behera, Madhusmita, Ramalingam, Suresh S., Owonikoko, Taofeek K., Sica, Gabriel L., Ye, Keqiang, Zhang, Chao, Chen, Zhengjia, Curran, Walter J., Deng, Xingm

Journal:

Cancer Research

Year:

2019

Language:

english

File:

PDF, 19.41 MB

english, 2019

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